==================================================
file name: gma.fa                   
sequences:          1168
total length:  973344380 bp  (955054837 bp excl N/X-runs)
GC level:         34.75 %
bases masked:  194125205 bp ( 19.94 %)
==================================================
               number of      length   percentage
               elements*    occupied  of sequence
--------------------------------------------------
Retroelements       104729    162085222 bp   16.65 %
   SINEs:                0            0 bp    0.00 %
   Penelope              0            0 bp    0.00 %
   LINEs:                0            0 bp    0.00 %
    CRE/SLACS            0            0 bp    0.00 %
     L2/CR1/Rex          0            0 bp    0.00 %
     R1/LOA/Jockey       0            0 bp    0.00 %
     R2/R4/NeSL          0            0 bp    0.00 %
     RTE/Bov-B           0            0 bp    0.00 %
     L1/CIN4             0            0 bp    0.00 %
   LTR elements:    104729    162085222 bp   16.65 %
     BEL/Pao             0            0 bp    0.00 %
     Ty1/Copia       36832     44048099 bp    4.53 %
     Gypsy/DIRS1     67897    118037123 bp   12.13 %
       Retroviral        0            0 bp    0.00 %

DNA transposons      10444      3902101 bp    0.40 %
   hobo-Activator        0            0 bp    0.00 %
   Tc1-IS630-Pogo        0            0 bp    0.00 %
   En-Spm            10444      3902101 bp    0.40 %
   MuDR-IS905            0            0 bp    0.00 %
   PiggyBac              0            0 bp    0.00 %
   Tourist/Harbinger     0            0 bp    0.00 %
   Other (Mirage,        0            0 bp    0.00 %
    P-element, Transib)

Rolling-circles          0            0 bp    0.00 %

Unclassified:            0            0 bp    0.00 %

Total interspersed repeats:   165987323 bp   17.05 %


Small RNA:             341       551781 bp    0.06 %

Satellites:              1           48 bp    0.00 %
Simple repeats:     108791      5767498 bp    0.59 %
Low complexity:     284170     21878652 bp    2.25 %
==================================================

* most repeats fragmented by insertions or deletions
  have been counted as one element
                                                      

The query species was assumed to be glycine max   
RepeatMasker version open-3.2.8 , sensitive mode
                                 
run with blastp version 3.0PE-AB [2009-10-30] [linux26-x64-I32LPF64 2009-11-17T18:52:53]
RepBase Update 20090604, RM database version 20090604